Burkholderia diffusa
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia diffusa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia diffusa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia diffusa
NCBI Strain Identifiers RF8-non_BP2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001718315.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.28%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 51
N50 Contigs 263,501 bp
Longest Contig 711,759 bp
Scaffold Count 51
N50 Scaffolds 263,501 bp
Longest Scaffold 711,759 bp
Genome Size 5,841,569 bp
Protein Count 5,256
Coding Density 87.05%
GC Percentage 66.70%
Ambiguous Bases N/A
GTDB representative GCA_001718315.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152237v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449136
Country Thailand: Ubon; Trakam
Date 2016-1-21
Genbank Assembly Accession GCA_001522375.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 15.64 N 105.03 E
Molecule Count N/A
CDS Count 5,358
Refseq Category na
Seq Rel Date 2016/01/21
Spanned Gaps 0
Species Taxid 488732
SSU Count 1
Submitter Northern Arizona University
Taxid 488732
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOTC00000000.1