Burkholderia ubonensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia ubonensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia ubonensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia ubonensis
NCBI Strain Identifiers INT1-BP31
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000959245.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 2.02%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 114
N50 Contigs 178,256 bp
Longest Contig 405,402 bp
Scaffold Count 114
N50 Scaffolds 178,256 bp
Longest Scaffold 405,402 bp
Genome Size 7,661,898 bp
Protein Count 6,855
Coding Density 87.51%
GC Percentage 67.17%
Ambiguous Bases N/A
GTDB representative GCA_000959245.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152217v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449154
Country Thailand: Ubon
Date 2016-1-21
Genbank Assembly Accession GCA_001522175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 15.42 N 104.95 E
Molecule Count N/A
CDS Count 6,924
Refseq Category na
Seq Rel Date 2016/01/21
Spanned Gaps 0
Species Taxid 101571
SSU Count 1
Submitter Northern Arizona University
Taxid 101571
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOTS00000000.1