Elizabethkingia meningoseptica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Weeksellaceae; g__Elizabethkingia; s__Elizabethkingia meningoseptica
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Elizabethkingia; s__Elizabethkingia meningoseptica
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Elizabethkingia; s__Elizabethkingia meningoseptica
NCBI Strain Identifiers KC1913
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000367325.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 45
N50 Contigs 599,592 bp
Longest Contig 765,934 bp
Scaffold Count 24
N50 Scaffolds 599,592 bp
Longest Scaffold 765,934 bp
Genome Size 3,853,643 bp
Protein Count 3,468
Coding Density 88.19%
GC Percentage 36.43%
Ambiguous Bases 55
GTDB representative GCA_000367325.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM152175v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04254555
Country USA: Massachusetts
Date 2016-1-21
Genbank Assembly Accession GCA_001521755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source cerebrospinal fluid
Latitude Longitude None
Molecule Count N/A
CDS Count 3,424
Refseq Category na
Seq Rel Date 2016/01/21
Spanned Gaps 21
Species Taxid 238
SSU Count 1
Submitter CDC
Taxid 238
Total Gap Length 1954
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNOH00000000.1