Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
NCBI Strain Identifiers GN02766
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.87%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 3
N50 Contigs 5,242,287 bp
Longest Contig 5,242,287 bp
Scaffold Count 3
N50 Scaffolds 5,242,287 bp
Longest Scaffold 5,242,287 bp
Genome Size 5,408,116 bp
Protein Count 5,176
Coding Density 87.32%
GC Percentage 50.43%
Ambiguous Bases N/A
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152081v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04388539
Country USA
Date 2018-12-9
Genbank Assembly Accession GCA_001520815.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 36 N 78.9 W
Molecule Count N/A
CDS Count 5,330
Refseq Category na
Seq Rel Date 2018/12/09
Spanned Gaps 0
Species Taxid 562
SSU Count 7
Submitter JCVI
Taxid 562
Total Gap Length 0
Translation Table 11
tRNA Count (total) 95
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQVG00000000.2