GCF_001520575.1
Escherichia coli_D
Isolate HQ 5S/16S/23S 19 tRNAs
Genome Characteristics
CheckM Completeness 99.61%
CheckM Contamination 1.13%
CheckM Strain Heterogeneity 85.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 313
N50 Contigs 31,613 bp
Longest Contig 104,017 bp
Scaffold Count 313
N50 Scaffolds 31,613 bp
Longest Scaffold 104,017 bp
Genome Size 5,188,752 bp
Protein Count 5,052
Coding Density 87.96%
GC Percentage 50.62%
Ambiguous Bases 0
GTDB representative GCA_000026325.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152057v1
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN04388531
Country USA
Date 2016-01-20
Genbank Assembly Accession GCA_001520575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 36 N 78.9 W
Molecule Count N/A
CDS Count 5,297
Refseq Category na
Seq Rel Date 2016/01/20
Spanned Gaps 0
Species Taxid 562
SSU Count 1
Submitter JCVI
Taxid 562
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQVA00000000.1