Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers M098442
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.06%
CheckM Strain Heterogeneity 50.0
5S Count 5
16S Count 2
23S Count 1
tRNA Count 17
Contig Count 129
N50 Contigs 178,611 bp
Longest Contig 474,829 bp
Scaffold Count 129
N50 Scaffolds 178,611 bp
Longest Scaffold 474,829 bp
Genome Size 5,594,952 bp
Protein Count 5,389
Coding Density 87.96%
GC Percentage 57.12%
Ambiguous Bases 6
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM151779v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03178260
Country Netherlands: Breda
Date 2016-1-19
Genbank Assembly Accession GCA_001517795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Environment
Latitude Longitude 51.34 N 4.48 E
Molecule Count N/A
CDS Count 5,669
Refseq Category na
Seq Rel Date 2016/01/19
Spanned Gaps 0
Species Taxid 573
SSU Count 2
Submitter unverisity medical center groningen
Taxid 573
Total Gap Length 0
Translation Table 11
tRNA Count (total) 69
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTFZ00000000.1