Staphylococcus epidermidis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
NCBI Strain Identifiers SNUT
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 51
N50 Contigs 383,151 bp
Longest Contig 675,335 bp
Scaffold Count 48
N50 Scaffolds 707,355 bp
Longest Scaffold 1,112,039 bp
Genome Size 2,511,658 bp
Protein Count 2,345
Coding Density 83.17%
GC Percentage 31.97%
Ambiguous Bases 6
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM151678v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04386398
Country South Korea: Seoul
Date 2016-1-15
Genbank Assembly Accession GCA_001516785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source toluene treated bioreactor sludge
Latitude Longitude None
Molecule Count N/A
CDS Count 2,417
Refseq Category na
Seq Rel Date 2016/01/15
Spanned Gaps 3
Species Taxid 1282
SSU Count 4
Submitter Seoul National University of Science and Technology
Taxid 1282
Total Gap Length 321
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQRB00000000.1