Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. aureus
NCBI Strain Identifiers HC1340
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 1
N50 Contigs 3,046,545 bp
Longest Contig 3,046,545 bp
Scaffold Count 1
N50 Scaffolds 3,046,545 bp
Longest Scaffold 3,046,545 bp
Genome Size 3,046,545 bp
Protein Count 2,902
Coding Density 83.97%
GC Percentage 32.94%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM151574v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03835492
Country Brazil: Rio de Janeiro city
Date 2016-1-15
Genbank Assembly Accession GCA_001515745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source From patient ssociated to Home Care assistance
Latitude Longitude None
Molecule Count 1
CDS Count 3,166
Refseq Category na
Seq Rel Date 2016/01/15
Spanned Gaps 0
Species Taxid 1280
SSU Count 5
Submitter LNCC
Taxid 46170
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None