Dehalococcoides mccartyi_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Chloroflexota; c__Dehalococcoidia; o__Dehalococcoidales; f__Dehalococcoidaceae; g__Dehalococcoides; s__Dehalococcoides mccartyi_B
Filtered NCBI Taxonomy d__Bacteria; p__Chloroflexi; c__Dehalococcoidia; o__Dehalococcoidales; f__Dehalococcoidaceae; g__Dehalococcoides; s__Dehalococcoides mccartyi
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Chloroflexi; c__Dehalococcoidia; o__Dehalococcoidales; f__Dehalococcoidaceae; g__Dehalococcoides; s__Dehalococcoides mccartyi
NCBI Strain Identifiers JNA
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000830885.1)
Genome Characteristics
CheckM Completeness 99.01%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 7
N50 Contigs 1,142,839 bp
Longest Contig 1,142,839 bp
Scaffold Count 7
N50 Scaffolds 1,142,839 bp
Longest Scaffold 1,142,839 bp
Genome Size 1,462,509 bp
Protein Count 1,546
Coding Density 89.98%
GC Percentage 47.06%
Ambiguous Bases N/A
GTDB representative GCA_000830885.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM151529v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03143573
Country USA: Housatonic River; Lenox
Date 2016-1-15
Genbank Assembly Accession GCA_001515295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sediment of Woods Pond section of the Housatonic River
Latitude Longitude None
Molecule Count N/A
CDS Count 1,533
Refseq Category na
Seq Rel Date 2016/01/15
Spanned Gaps 0
Species Taxid 61435
SSU Count 1
Submitter National University of Singapore
Taxid 61435
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JSWM00000000.1