Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
NCBI Strain Identifiers CB10113
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000759775.1)
Genome Characteristics
CheckM Completeness 98.3%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 148
N50 Contigs 115,397 bp
Longest Contig 369,984 bp
Scaffold Count 144
N50 Scaffolds 124,577 bp
Longest Scaffold 369,984 bp
Genome Size 4,715,204 bp
Protein Count 4,521
Coding Density 87.21%
GC Percentage 49.56%
Ambiguous Bases 51
GTDB representative GCA_000759775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM151482v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00026628
Country None
Date 2015-11-06
Genbank Assembly Accession GCA_001514825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source isolated from diarrheal patient
Latitude Longitude None
Molecule Count N/A
CDS Count 4,821
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 4
Species Taxid 208962
SSU Count 1
Submitter University of Miyazaki
Taxid 208962
Total Gap Length 80
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BBVR00000000.1