Escherichia albertii
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
NCBI Strain Identifiers NIAH_Bird_5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000759775.1)
Genome Characteristics
CheckM Completeness 98.56%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 4
tRNA Count 18
Contig Count 110
N50 Contigs 140,777 bp
Longest Contig 383,621 bp
Scaffold Count 106
N50 Scaffolds 144,618 bp
Longest Scaffold 383,621 bp
Genome Size 4,830,654 bp
Protein Count 4,700
Coding Density 87.20%
GC Percentage 49.43%
Ambiguous Bases 30
GTDB representative GCA_000759775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM151478v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00026651
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001514785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source isolated from diarrheal patient
Latitude Longitude None
Molecule Count N/A
CDS Count 4,946
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 4
Species Taxid 208962
SSU Count 1
Submitter University of Miyazaki
Taxid 208962
Total Gap Length 84
Translation Table 11
tRNA Count (total) 83
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BBVP00000000.1