Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
NCBI Strain Identifiers NIAH_Bird_25
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000759775.1)
Genome Characteristics
CheckM Completeness 98.6%
CheckM Contamination 0.14%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 3
tRNA Count 16
Contig Count 125
N50 Contigs 103,524 bp
Longest Contig 342,044 bp
Scaffold Count 113
N50 Scaffolds 167,130 bp
Longest Scaffold 342,044 bp
Genome Size 4,776,752 bp
Protein Count 4,571
Coding Density 87.13%
GC Percentage 49.41%
Ambiguous Bases 32
GTDB representative GCA_000759775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM151474v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00026648
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001514745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source isolated from diarrheal patient
Latitude Longitude None
Molecule Count N/A
CDS Count 4,843
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 12
Species Taxid 208962
SSU Count 1
Submitter University of Miyazaki
Taxid 208962
Total Gap Length 411
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BBVN00000000.1