Escherichia albertii
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
NCBI Strain Identifiers NIAH_Bird_24
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000759775.1)
Genome Characteristics
CheckM Completeness 98.6%
CheckM Contamination 0.68%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 17
Contig Count 105
N50 Contigs 148,208 bp
Longest Contig 389,240 bp
Scaffold Count 94
N50 Scaffolds 182,032 bp
Longest Scaffold 438,710 bp
Genome Size 4,783,301 bp
Protein Count 4,553
Coding Density 87.60%
GC Percentage 49.64%
Ambiguous Bases 31
GTDB representative GCA_000759775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM151472v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00026647
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001514725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source isolated from diarrheal patient
Latitude Longitude None
Molecule Count N/A
CDS Count 4,785
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 11
Species Taxid 208962
SSU Count 1
Submitter University of Miyazaki
Taxid 208962
Total Gap Length 215
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BBVM00000000.1