Escherichia albertii
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia albertii
NCBI Strain Identifiers Jun-51
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000759775.1)
Genome Characteristics
CheckM Completeness 98.12%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 18
Contig Count 88
N50 Contigs 166,861 bp
Longest Contig 346,931 bp
Scaffold Count 84
N50 Scaffolds 208,980 bp
Longest Scaffold 346,931 bp
Genome Size 4,700,514 bp
Protein Count 4,558
Coding Density 87.37%
GC Percentage 49.70%
Ambiguous Bases 11
GTDB representative GCA_000759775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM151459v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00026626
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001514595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source isolated from diarrheal patient
Latitude Longitude None
Molecule Count N/A
CDS Count 4,813
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 4
Species Taxid 208962
SSU Count 2
Submitter University of Miyazaki
Taxid 208962
Total Gap Length 79
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BBVG00000000.1