Streptomyces avermitilis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces avermitilis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces avermitilis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces avermitilis
NCBI Strain Identifiers DSM 46492
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000009765.2)
Genome Characteristics
CheckM Completeness 99.89%
CheckM Contamination 1.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 124
N50 Contigs 247,714 bp
Longest Contig 1,261,684 bp
Scaffold Count 75
N50 Scaffolds 489,586 bp
Longest Scaffold 1,432,134 bp
Genome Size 8,950,231 bp
Protein Count 7,876
Coding Density 86.02%
GC Percentage 70.74%
Ambiguous Bases N/A
GTDB representative GCA_000009765.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM151413v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04193349
Country USA: Philadelphia; Longwood Gardens; Kennet Square
Date 2016-01-13
Genbank Assembly Accession GCA_001514135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 7,929
Refseq Category na
Seq Rel Date 2016/01/13
Spanned Gaps 49
Species Taxid 33903
SSU Count 1
Submitter Bielefeld University
Taxid 33903
Total Gap Length 27693
Translation Table 11
tRNA Count (total) 71
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LMWT00000000.1