Pseudomonas_E sp001511755
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E sp001511755
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. URMO17WK12:I11
NCBI Strain Identifiers Shine
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.56%
CheckM Strain Heterogeneity 33.33
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 6,374,437 bp
Longest Contig 6,374,437 bp
Scaffold Count 1
N50 Scaffolds 6,374,437 bp
Longest Scaffold 6,374,437 bp
Genome Size 6,374,437 bp
Protein Count 5,715
Coding Density 88.19%
GC Percentage 59.23%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name Shine
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3393040
Country None
Date 2015-11-17
Genbank Assembly Accession GCA_001511755.1
Genome Category Isolate
Genome Representation full
Isolate Shine
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 5,742
Refseq Category na
Seq Rel Date 2015/11/17
Spanned Gaps 0
Species Taxid 1283291
SSU Count 6
Submitter SIB
Taxid 1283291
Total Gap Length 0
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None