Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
NCBI Strain Identifiers SMC1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000754275.1)
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 23
N50 Contigs 202,696 bp
Longest Contig 622,680 bp
Scaffold Count 23
N50 Scaffolds 202,696 bp
Longest Scaffold 622,680 bp
Genome Size 2,276,171 bp
Protein Count 2,084
Coding Density 89.45%
GC Percentage 40.27%
Ambiguous Bases N/A
GTDB representative GCA_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM151077v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04259798
Country Malaysia: Bandar Sunway; Selangor
Date 2016-1-11
Genbank Assembly Accession GCA_001510775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source finger bone biopsy
Latitude Longitude None
Molecule Count N/A
CDS Count 2,079
Refseq Category na
Seq Rel Date 2016/01/11
Spanned Gaps 0
Species Taxid 747
SSU Count 3
Submitter Monash University Malaysia
Taxid 747
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNCO00000000.1