Streptococcus equi
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equi
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equi
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; x__Streptococcus dysgalactiae group; s__Streptococcus equi; sb__Streptococcus equi subsp. equi
NCBI Strain Identifiers 19
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900637675.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 72
N50 Contigs 42,054 bp
Longest Contig 136,508 bp
Scaffold Count 72
N50 Scaffolds 42,054 bp
Longest Scaffold 136,508 bp
Genome Size 2,065,476 bp
Protein Count 1,954
Coding Density 85.66%
GC Percentage 41.23%
Ambiguous Bases N/A
GTDB representative GCA_900637675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM151063v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04221177
Country Ireland
Date 2016-1-11
Genbank Assembly Accession GCA_001510635.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Mandibular lymphnode abscess
Latitude Longitude None
Molecule Count N/A
CDS Count 1,937
Refseq Category na
Seq Rel Date 2016/01/11
Spanned Gaps 0
Species Taxid 1336
SSU Count 1
Submitter University of Kentucky
Taxid 148942
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMTY00000000.1