Bordetella pertussis
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 100.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 4,079,396 bp
Longest Contig 4,079,396 bp
Scaffold Count 1
N50 Scaffolds 4,079,396 bp
Longest Scaffold 4,079,396 bp
Genome Size 4,079,396 bp
Protein Count 3,879
Coding Density 90.24%
GC Percentage 67.71%
Ambiguous Bases 0
GTDB representative GCA_000306945.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM150989v1
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN03366100
Country France
Date 2016-01-11
Genbank Assembly Accession GCA_001509895.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,910
Refseq Category na
Seq Rel Date 2016/01/11
Spanned Gaps 0
Species Taxid 520
SSU Count 3
Submitter Centers for Disease Control and Prevention
Taxid 520
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None