Chryseobacterium greenlandense
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Weeksellaceae; g__Chryseobacterium; s__Chryseobacterium greenlandense
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Chryseobacterium; s__Chryseobacterium greenlandense
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Chryseobacterium; s__Chryseobacterium greenlandense
NCBI Strain Identifiers UMB34
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 21
N50 Contigs 610,603 bp
Longest Contig 802,974 bp
Scaffold Count 21
N50 Scaffolds 610,603 bp
Longest Scaffold 802,974 bp
Genome Size 4,036,521 bp
Protein Count 3,726
Coding Density 89.30%
GC Percentage 34.09%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM150732v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04209272
Country Greenland: deep ice core
Date 2016-01-07
Genbank Assembly Accession GCA_001507325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source ice core
Latitude Longitude None
Molecule Count N/A
CDS Count 3,623
Refseq Category na
Seq Rel Date 2016/01/07
Spanned Gaps 0
Species Taxid 345663
SSU Count 1
Submitter GCAT-SEEK
Taxid 345663
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LMAI00000000.1