Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Dickeya; s__Dickeya solani
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pectobacteriaceae; g__Dickeya; s__Dickeya solani
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pectobacteriaceae; g__Dickeya; s__Dickeya solani
NCBI Strain Identifiers PPO 9019
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001644705.1)
Genome Characteristics
CheckM Completeness 99.99%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 1
tRNA Count 18
Contig Count 27
N50 Contigs 485,395 bp
Longest Contig 1,553,733 bp
Scaffold Count 25
N50 Scaffolds 485,395 bp
Longest Scaffold 1,553,733 bp
Genome Size 4,910,404 bp
Protein Count 4,205
Coding Density 86.50%
GC Percentage 56.33%
Ambiguous Bases 5
GTDB representative GCA_001644705.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM150612v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03266541
Country Netherlands
Date 2016-1-7
Genbank Assembly Accession GCA_001506125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 4,253
Refseq Category na
Seq Rel Date 2016/01/07
Spanned Gaps 2
Species Taxid 1089444
SSU Count 0
Submitter CNRS - UPR2355
Taxid 1089444
Total Gap Length 25
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWLS00000000.1