Mycobacterium sp001500065
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp001500065
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp. IS-3022
NCBI Strain Identifiers IS-3022
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 3.64%
CheckM Strain Heterogeneity 100.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 51
N50 Contigs 229,998 bp
Longest Contig 726,325 bp
Scaffold Count 51
N50 Scaffolds 229,998 bp
Longest Scaffold 726,325 bp
Genome Size 5,168,733 bp
Protein Count 4,998
Coding Density 93.05%
GC Percentage 67.02%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM150006v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04349494
Country India
Date 2016-1-6
Genbank Assembly Accession GCA_001500065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,939
Refseq Category na
Seq Rel Date 2016/01/06
Spanned Gaps 0
Species Taxid 1772277
SSU Count 1
Submitter JCVI
Taxid 1772277
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQIN00000000.1