Mycobacterium sp001499995
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp001499995
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp. IS-1496
NCBI Strain Identifiers IS-1496
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 76
N50 Contigs 114,691 bp
Longest Contig 416,421 bp
Scaffold Count 76
N50 Scaffolds 114,691 bp
Longest Scaffold 416,421 bp
Genome Size 5,286,172 bp
Protein Count 5,062
Coding Density 92.87%
GC Percentage 69.01%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM149999v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04349501
Country India
Date 2016-1-6
Genbank Assembly Accession GCA_001499995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,006
Refseq Category na
Seq Rel Date 2016/01/06
Spanned Gaps 0
Species Taxid 1772284
SSU Count 1
Submitter JCVI
Taxid 1772284
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQIU00000000.1