Mycobacterium sp001499855
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp001499855
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp. IS-1556
NCBI Strain Identifiers IS-1556
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001499855.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.45%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 42
N50 Contigs 340,146 bp
Longest Contig 645,331 bp
Scaffold Count 42
N50 Scaffolds 340,146 bp
Longest Scaffold 645,331 bp
Genome Size 5,214,044 bp
Protein Count 5,005
Coding Density 92.63%
GC Percentage 66.96%
Ambiguous Bases N/A
GTDB representative GCA_001499855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM149998v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04349493
Country India
Date 2016-1-6
Genbank Assembly Accession GCA_001499985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,950
Refseq Category na
Seq Rel Date 2016/01/06
Spanned Gaps 0
Species Taxid 1772276
SSU Count 1
Submitter JCVI
Taxid 1772276
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQIM00000000.1