Mycobacterium sp001499855
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp001499855
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp. GA-0227b
NCBI Strain Identifiers GA-0227b
GTDB Type Material Designation not type material
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.45%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 34
N50 Contigs 329,016 bp
Longest Contig 559,936 bp
Scaffold Count 34
N50 Scaffolds 329,016 bp
Longest Scaffold 559,936 bp
Genome Size 5,148,113 bp
Protein Count 4,929
Coding Density 92.56%
GC Percentage 66.92%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM149985v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04349491
Country India
Date 2016-1-6
Genbank Assembly Accession GCA_001499855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,874
Refseq Category na
Seq Rel Date 2016/01/06
Spanned Gaps 0
Species Taxid 1772274
SSU Count 1
Submitter JCVI
Taxid 1772274
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQIK00000000.1