Mycobacterium sp001494595
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp001494595
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp. M26
NCBI Strain Identifiers M26
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.58%
CheckM Contamination 0.81%
CheckM Strain Heterogeneity 66.67
5S Count 0
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 12
N50 Contigs 1,520,778 bp
Longest Contig 2,098,509 bp
Scaffold Count 9
N50 Scaffolds 3,756,539 bp
Longest Scaffold 3,756,539 bp
Genome Size 5,732,010 bp
Protein Count 5,507
Coding Density 93.40%
GC Percentage 67.54%
Ambiguous Bases 2
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Mycobacterium massilipolynesiensis
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3696413
Country None
Date 2015-12-23
Genbank Assembly Accession GCA_001494595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,440
Refseq Category na
Seq Rel Date 2015/12/23
Spanned Gaps 3
Species Taxid 1762962
SSU Count 2
Submitter URMITE
Taxid 1762962
Total Gap Length 451
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FAXD00000000.1