Campylobacter_D coli_B
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D coli_B
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
NCBI Strain Identifiers a;C8C3;n/a;n
GTDB Type Material Designation not type material
GTDB Representative of Species True (46 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.9%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 2
N50 Contigs 1,810,920 bp
Longest Contig 1,810,920 bp
Scaffold Count 2
N50 Scaffolds 1,810,920 bp
Longest Scaffold 1,810,920 bp
Genome Size 1,854,051 bp
Protein Count 1,889
Coding Density 92.40%
GC Percentage 31.23%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name C8C3
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3683221
Country None
Date 2015-12-18
Genbank Assembly Accession GCA_001492295.1
Genome Category Isolate
Genome Representation full
Isolate C8C3
Isolation Source environmental waters
Latitude Longitude None
Molecule Count N/A
CDS Count 1,866
Refseq Category na
Seq Rel Date 2015/12/18
Spanned Gaps 0
Species Taxid 195
SSU Count 3
Submitter INSTITUTE OF FOOD RESEARCH
Taxid 195
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FBQX00000000.1