Gabonibacter massiliensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Marinifilaceae; g__Gabonibacter; s__Gabonibacter massiliensis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Gabonibacter; s__Gabonibacter massiliensis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Gabonibacter; s__Gabonibacter massiliensis
NCBI Strain Identifiers GM7
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (4 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 8
N50 Contigs 980,938 bp
Longest Contig 1,342,664 bp
Scaffold Count 7
N50 Scaffolds 2,324,047 bp
Longest Scaffold 2,324,047 bp
Genome Size 3,397,023 bp
Protein Count 2,820
Coding Density 90.06%
GC Percentage 42.09%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Sanguibacteroides massiliensis
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3674818
Country None
Date 2015-12-22
Genbank Assembly Accession GCA_001487125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,786
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 1
Species Taxid 1720195
SSU Count 2
Submitter URMITE
Taxid 1720195
Total Gap Length 445
Translation Table 11
tRNA Count (total) 54
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master FAVK00000000.1