Campylobacter hyointestinalis
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter hyointestinalis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter fetus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter fetus; sb__Campylobacter fetus subsp. fetus
NCBI Strain Identifiers 006A-0091
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900116585.1)
Genome Characteristics
CheckM Completeness 99.88%
CheckM Contamination 0.74%
CheckM Strain Heterogeneity 100.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 20
N50 Contigs 251,276 bp
Longest Contig 447,086 bp
Scaffold Count 13
N50 Scaffolds 563,463 bp
Longest Scaffold 646,376 bp
Genome Size 1,784,641 bp
Protein Count 1,884
Coding Density 91.73%
GC Percentage 33.97%
Ambiguous Bases N/A
GTDB representative GCA_900116585.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 17150_1#78
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3310291
Country None
Date 2015-12-15
Genbank Assembly Accession GCA_001486805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,831
Refseq Category na
Seq Rel Date 2015/12/15
Spanned Gaps 7
Species Taxid 196
SSU Count 1
Submitter SC
Taxid 32019
Total Gap Length 536
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FAVE00000000.1