RUG013 sp001486445
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Coriobacteriia; o__Coriobacteriales; f__Eggerthellaceae; g__RUG013; s__RUG013 sp001486445
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Coriobacteriia; o__Eggerthellales; f__Eggerthellaceae; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Coriobacteriia; o__Eggerthellales; f__Eggerthellaceae; x__unclassified Eggerthellaceae; s__Eggerthellaceae bacterium AT8
NCBI Strain Identifiers AT8
GTDB Type Material Designation not type material
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.81%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 12
N50 Contigs 1,305,814 bp
Longest Contig 1,305,814 bp
Scaffold Count 9
N50 Scaffolds 1,475,894 bp
Longest Scaffold 1,475,894 bp
Genome Size 2,090,771 bp
Protein Count 1,782
Coding Density 86.69%
GC Percentage 63.46%
Ambiguous Bases 3
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Hugonella massiliensis
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3673154
Country None
Date 2015-12-22
Genbank Assembly Accession GCA_001486445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,763
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 3
Species Taxid 1720315
SSU Count 6
Submitter URMITE
Taxid 1720315
Total Gap Length 603
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FAUL00000000.1