Streptococcus agalactiae
Isolate HQ 5S/16S/23S 10 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers GB00037
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 99.77%
CheckM Contamination 1.06%
CheckM Strain Heterogeneity 60.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 10
Contig Count 361
N50 Contigs 12,194 bp
Longest Contig 35,442 bp
Scaffold Count 361
N50 Scaffolds 12,194 bp
Longest Scaffold 35,442 bp
Genome Size 2,045,700 bp
Protein Count 2,185
Coding Density 89.29%
GC Percentage 35.27%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM148486v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03801951
Country Canada: Calgary
Date 2016-1-5
Genbank Assembly Accession GCA_001484865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude 51.04 N 114.07 W
Molecule Count N/A
CDS Count 2,223
Refseq Category na
Seq Rel Date 2016/01/05
Spanned Gaps 0
Species Taxid 1311
SSU Count 1
Submitter MSU
Taxid 1311
Total Gap Length 0
Translation Table 11
tRNA Count (total) 16
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LGAH00000000.1