Clostridium_B ljungdahlii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_B; s__Clostridium_B ljungdahlii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium autoethanogenum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium autoethanogenum; x__Clostridium autoethanogenum DSM 10061
NCBI Strain Identifiers DSM 10061
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000143685.1)
Genome Characteristics
CheckM Completeness 98.62%
CheckM Contamination 0.5%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 9
23S Count 9
tRNA Count 20
Contig Count 1
N50 Contigs 4,352,446 bp
Longest Contig 4,352,446 bp
Scaffold Count 1
N50 Scaffolds 4,352,446 bp
Longest Scaffold 4,352,446 bp
Genome Size 4,352,446 bp
Protein Count 3,969
Coding Density 84.59%
GC Percentage 31.09%
Ambiguous Bases N/A
GTDB representative GCA_000143685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM148472v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03956958
Country Belgium: Louvain-la-Neuve
Date 2016-1-4
Genbank Assembly Accession GCA_001484725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rabbit feces
Latitude Longitude None
Molecule Count 1
CDS Count 3,903
Refseq Category na
Seq Rel Date 2016/01/04
Spanned Gaps 0
Species Taxid 84023
SSU Count 9
Submitter JLU
Taxid 1341692
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None