Ralstonia pseudosolanacearum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Ralstonia; s__Ralstonia pseudosolanacearum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Ralstonia; s__Ralstonia solanacearum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Ralstonia; s__Ralstonia solanacearum
NCBI Strain Identifiers Rs-T02
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003999715.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 185
N50 Contigs 93,166 bp
Longest Contig 244,781 bp
Scaffold Count 169
N50 Scaffolds 100,558 bp
Longest Scaffold 244,781 bp
Genome Size 5,804,239 bp
Protein Count 5,108
Coding Density 87.32%
GC Percentage 66.92%
Ambiguous Bases N/A
GTDB representative GCA_003999715.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM148409v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04158631
Country China: Nanning
Date 2016-1-4
Genbank Assembly Accession GCA_001484095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,190
Refseq Category na
Seq Rel Date 2016/01/04
Spanned Gaps 16
Species Taxid 305
SSU Count 1
Submitter Guangxi University
Taxid 305
Total Gap Length 160
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKVH00000000.1