Pannonibacter indicus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Stappiaceae; g__Pannonibacter; s__Pannonibacter indicus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Pannonibacter; s__Pannonibacter phragmitetus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Pannonibacter; s__Pannonibacter phragmitetus
NCBI Strain Identifiers 31801
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001418225.1)
Genome Characteristics
CheckM Completeness 99.58%
CheckM Contamination 0.16%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 2
N50 Contigs 5,318,696 bp
Longest Contig 5,318,696 bp
Scaffold Count 2
N50 Scaffolds 5,318,696 bp
Longest Scaffold 5,318,696 bp
Genome Size 5,669,701 bp
Protein Count 5,131
Coding Density 87.51%
GC Percentage 63.37%
Ambiguous Bases N/A
GTDB representative GCA_001418225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM148406v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04158710
Country China: Fujian;Quanzhou
Date 2016-1-4
Genbank Assembly Accession GCA_001484065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude 24.93 N 118.66 E
Molecule Count 2
CDS Count 5,116
Refseq Category representative genome
Seq Rel Date 2016/01/04
Spanned Gaps 0
Species Taxid 121719
SSU Count 3
Submitter School of biomedical sciences
Taxid 121719
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None