Listeria monocytogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers Lm 3136
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187225.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 2,905,347 bp
Longest Contig 2,905,347 bp
Scaffold Count 1
N50 Scaffolds 2,905,347 bp
Longest Scaffold 2,905,347 bp
Genome Size 2,905,347 bp
Protein Count 2,845
Coding Density 89.18%
GC Percentage 38.04%
Ambiguous Bases N/A
GTDB representative GCA_900187225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM148342v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04348332
Country Switzerland
Date 2015-12-30
Genbank Assembly Accession GCA_001483425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude None
Molecule Count 1
CDS Count 2,878
Refseq Category na
Seq Rel Date 2015/12/30
Spanned Gaps 0
Species Taxid 1639
SSU Count 6
Submitter University of Zurich, Vetsuisse Faculty
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None