Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers L6-1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.28%
CheckM Strain Heterogeneity 33.33
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 2
N50 Contigs 6,012,170 bp
Longest Contig 6,012,170 bp
Scaffold Count 2
N50 Scaffolds 6,012,170 bp
Longest Scaffold 6,012,170 bp
Genome Size 6,795,250 bp
Protein Count 6,345
Coding Density 88.96%
GC Percentage 65.96%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM148323v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04325380
Country China: Xinjiang
Date 2015-12-29
Genbank Assembly Accession GCA_001483235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source formation water of oilfield produced fluid
Latitude Longitude None
Molecule Count N/A
CDS Count 6,507
Refseq Category na
Seq Rel Date 2015/12/29
Spanned Gaps 0
Species Taxid 287
SSU Count 4
Submitter Chinese Academy of Science
Taxid 287
Total Gap Length 0
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOJK00000000.1