Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers MOD1_LS47
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 21
N50 Contigs 542,083 bp
Longest Contig 576,219 bp
Scaffold Count 21
N50 Scaffolds 542,083 bp
Longest Scaffold 576,219 bp
Genome Size 2,961,706 bp
Protein Count 2,911
Coding Density 90.15%
GC Percentage 37.86%
Ambiguous Bases N/A
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM148179v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02769670
Country None
Date 2015-12-23
Genbank Assembly Accession GCA_001481795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source silage
Latitude Longitude None
Molecule Count N/A
CDS Count 2,954
Refseq Category na
Seq Rel Date 2015/12/23
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter FDA
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNOD00000000.1