Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
NCBI Strain Identifiers Y577
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 11
16S Count 3
23S Count 8
tRNA Count 20
Contig Count 104
N50 Contigs 101,766 bp
Longest Contig 383,049 bp
Scaffold Count 104
N50 Scaffolds 101,766 bp
Longest Scaffold 383,049 bp
Genome Size 4,736,406 bp
Protein Count 4,395
Coding Density 87.08%
GC Percentage 58.65%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM148154v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03395037
Country India
Date 2015-12-15
Genbank Assembly Accession GCA_001481545.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
Protein Count 4,351
Refseq Category na
Seq Rel Date 2015/12/15
Spanned Gaps 0
Species Taxid 645
SSU Count 9
Submitter Universite Laval
Taxid 645
Total Gap Length 0
Translation Table 11
tRNA Count (total) 115
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZTH00000000.1