Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
NCBI Strain Identifiers Y47
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 5
23S Count 9
tRNA Count 20
Contig Count 118
N50 Contigs 117,778 bp
Longest Contig 395,271 bp
Scaffold Count 118
N50 Scaffolds 117,778 bp
Longest Scaffold 395,271 bp
Genome Size 4,710,230 bp
Protein Count 4,375
Coding Density 86.58%
GC Percentage 58.49%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM148153v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03395034
Country India
Date 2015-12-15
Genbank Assembly Accession GCA_001481535.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 3
Protein Count 4,324
Refseq Category na
Seq Rel Date 2015/12/15
Spanned Gaps 0
Species Taxid 645
SSU Count 10
Submitter Universite Laval
Taxid 645
Total Gap Length 0
Translation Table 11
tRNA Count (total) 119
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZTF00000000.1