Streptococcus lutetiensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus lutetiensis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equinus
NCBI Strain Identifiers ICDDRB-NRC-S6
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900475675.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.5%
CheckM Strain Heterogeneity 83.33
5S Count 9
16S Count 9
23S Count 10
tRNA Count 20
Contig Count 5
N50 Contigs 670,716 bp
Longest Contig 863,256 bp
Scaffold Count 5
N50 Scaffolds 670,716 bp
Longest Scaffold 863,256 bp
Genome Size 1,849,355 bp
Protein Count 1,847
Coding Density 84.66%
GC Percentage 37.77%
Ambiguous Bases N/A
GTDB representative GCA_900475675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM148148v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04348604
Country Bangladesh: Dhaka
Date 2015-12-23
Genbank Assembly Accession GCA_001481485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool of a healthy control child
Latitude Longitude 24 N 90 E
Molecule Count N/A
CDS Count 1,762
Refseq Category na
Seq Rel Date 2015/12/23
Spanned Gaps 0
Species Taxid 1335
SSU Count 9
Submitter Nestle Research Center and Nestle Institute of Health Sciences
Taxid 1335
Total Gap Length 0
Translation Table 11
tRNA Count (total) 89
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPVR00000000.1