Ruthenibacterium lactatiformans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Oscillospirales; f__Ruminococcaceae; g__Ruthenibacterium; s__Ruthenibacterium lactatiformans
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Ruthenibacterium; s__Ruthenibacterium lactatiformans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Ruthenibacterium; s__Ruthenibacterium lactatiformans
NCBI Strain Identifiers 668
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000949455.1)
Genome Characteristics
CheckM Completeness 97.96%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 108
N50 Contigs 114,065 bp
Longest Contig 367,189 bp
Scaffold Count 108
N50 Scaffolds 114,065 bp
Longest Scaffold 367,189 bp
Genome Size 3,951,525 bp
Protein Count 3,793
Coding Density 86.92%
GC Percentage 56.65%
Ambiguous Bases N/A
GTDB representative GCA_000949455.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM148137v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04224338
Country Russia: Moscow
Date 2015-12-22
Genbank Assembly Accession GCA_001481375.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source human feces
Latitude Longitude None
Molecule Count N/A
CDS Count 3,807
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 1550024
SSU Count 1
Submitter Pirogov Russian National Research Medical University
Taxid 1550024
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMUA00000000.1