GCF_001480045.1
Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.48%
CheckM Strain Heterogeneity 20.0
5S Count 5
16S Count 3
23S Count 5
tRNA Count 20
Contig Count 83
N50 Contigs 197,601 bp
Longest Contig 743,623 bp
Scaffold Count 83
N50 Scaffolds 197,601 bp
Longest Scaffold 743,623 bp
Genome Size 5,025,984 bp
Protein Count 4,728
Coding Density 87.09%
GC Percentage 51.99%
Ambiguous Bases 0
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Salmonella enterica CVM N38909-SQ v1.0
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN02699299
Country USA: OR
Date 2015-12-22
Genbank Assembly Accession GCA_001480045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Chicken Breast
Latitude Longitude None
Molecule Count N/A
CDS Count 4,903
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 28901
SSU Count 4
Submitter FDA
Taxid 192955
Total Gap Length 0
Translation Table 11
tRNA Count (total) 80
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYXU00000000.1