Salmonella arizonae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella arizonae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. arizonae; x__Salmonella enterica subsp. arizonae serovar 18:z4,z23:-
NCBI Strain Identifiers CVM N31597
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000018625.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 1
23S Count 8
tRNA Count 20
Contig Count 100
N50 Contigs 134,013 bp
Longest Contig 429,034 bp
Scaffold Count 100
N50 Scaffolds 134,013 bp
Longest Scaffold 429,034 bp
Genome Size 4,487,062 bp
Protein Count 4,243
Coding Density 86.83%
GC Percentage 51.49%
Ambiguous Bases N/A
GTDB representative GCA_000018625.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Salmonella enterica CVM N31597-SQ v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02699243
Country USA: OR
Date 2015-12-22
Genbank Assembly Accession GCA_001479245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Ground Turkey
Latitude Longitude None
Molecule Count N/A
CDS Count 4,428
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter FDA
Taxid 1192839
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYVQ00000000.1