Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Pantoea; s__Pantoea dispersa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea dispersa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea dispersa
NCBI Strain Identifiers RSA31
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000465555.2)
Genome Characteristics
CheckM Completeness 99.98%
CheckM Contamination 0.85%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 3
tRNA Count 19
Contig Count 194
N50 Contigs 266,158 bp
Longest Contig 1,149,077 bp
Scaffold Count 194
N50 Scaffolds 266,158 bp
Longest Scaffold 1,149,077 bp
Genome Size 4,949,525 bp
Protein Count 4,637
Coding Density 88.21%
GC Percentage 57.75%
Ambiguous Bases N/A
GTDB representative GCA_000465555.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147716v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401417
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001477165.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,598
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 59814
SSU Count 1
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 59814
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDSC00000000.1