Sphingomonas sanguinis_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__Sphingomonas sanguinis_B
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__Sphingomonas sanguinis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__Sphingomonas sanguinis
NCBI Strain Identifiers SB4
GTDB Type Material Designation not type material
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.18%
CheckM Contamination 0.56%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 226
N50 Contigs 40,305 bp
Longest Contig 199,076 bp
Scaffold Count 226
N50 Scaffolds 40,305 bp
Longest Scaffold 199,076 bp
Genome Size 4,019,493 bp
Protein Count 3,818
Coding Density 90.16%
GC Percentage 65.91%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147690v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401383
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001476905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,746
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 33051
SSU Count 1
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 33051
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDTE00000000.1