Pseudacidovorax intermedius_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Pseudacidovorax; s__Pseudacidovorax intermedius_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Pseudacidovorax; s__Pseudacidovorax intermedius
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Pseudacidovorax; s__Pseudacidovorax intermedius
NCBI Strain Identifiers NS331
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.6%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 100.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 295
N50 Contigs 34,362 bp
Longest Contig 193,473 bp
Scaffold Count 295
N50 Scaffolds 34,362 bp
Longest Scaffold 193,473 bp
Genome Size 5,546,132 bp
Protein Count 5,163
Coding Density 91.23%
GC Percentage 70.18%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147681v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401387
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001476815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,071
Refseq Category representative genome
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 433924
SSU Count 1
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 433924
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDSL00000000.1