Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Pantoea; s__Pantoea stewartii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea stewartii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea stewartii
NCBI Strain Identifiers RSA30
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000757405.1)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.41%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 84
N50 Contigs 211,952 bp
Longest Contig 382,170 bp
Scaffold Count 84
N50 Scaffolds 211,952 bp
Longest Scaffold 382,170 bp
Genome Size 4,760,375 bp
Protein Count 4,441
Coding Density 86.42%
GC Percentage 53.68%
Ambiguous Bases N/A
GTDB representative GCA_000757405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147679v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401415
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001476795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,408
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 66269
SSU Count 1
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 66269
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDSJ00000000.1