Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Pantoea; s__Pantoea dispersa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea dispersa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea dispersa
NCBI Strain Identifiers SA5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000465555.2)
Genome Characteristics
CheckM Completeness 99.61%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 98
N50 Contigs 190,714 bp
Longest Contig 664,133 bp
Scaffold Count 98
N50 Scaffolds 190,714 bp
Longest Scaffold 664,133 bp
Genome Size 4,897,024 bp
Protein Count 4,502
Coding Density 87.68%
GC Percentage 57.56%
Ambiguous Bases N/A
GTDB representative GCA_000465555.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147676v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401409
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001476765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,505
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 59814
SSU Count 1
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 59814
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDSG00000000.1