Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Pantoea; s__Pantoea dispersa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea dispersa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea dispersa
NCBI Strain Identifiers SA2
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.98%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 52
N50 Contigs 255,271 bp
Longest Contig 534,243 bp
Scaffold Count 52
N50 Scaffolds 255,271 bp
Longest Scaffold 534,243 bp
Genome Size 4,906,145 bp
Protein Count 4,475
Coding Density 87.68%
GC Percentage 57.55%
Ambiguous Bases 0
GTDB representative GCF_000465555.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147674v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401406
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001476745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,485
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 59814
SSU Count 1
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 59814
Total Gap Length 0
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDSD00000000.1