Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Pantoea; s__Pantoea dispersa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea dispersa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea dispersa
NCBI Strain Identifiers NS389
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.98%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 54
N50 Contigs 228,728 bp
Longest Contig 426,513 bp
Scaffold Count 54
N50 Scaffolds 228,728 bp
Longest Scaffold 426,513 bp
Genome Size 4,819,785 bp
Protein Count 4,412
Coding Density 87.84%
GC Percentage 57.66%
Ambiguous Bases 0
GTDB representative GCF_000465555.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147673v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401413
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001476735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,398
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 59814
SSU Count 2
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 59814
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDSB00000000.1